Jochem Smit commited on
Commit
544da8b
1 Parent(s): 5e5b762

add .cif ipymolstar viewer app

Browse files
Files changed (2) hide show
  1. app.py +39 -1
  2. requirements.txt +2 -1
app.py CHANGED
@@ -1,6 +1,44 @@
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  import solara
 
 
 
 
 
 
 
 
 
 
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  @solara.component
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  def Page():
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- solara.Text("hello")
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
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  import solara
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+ from ipymolstar import PDBeMolstar
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+ from solara.components.file_drop import FileInfo
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+
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+
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+ # gives an error, should be some error-less empty data file
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+ custom_data_initial = {
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+ "data": b"data_",
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+ "format": "cif",
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+ "binary": False,
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+ }
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  @solara.component
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  def Page():
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+ custom_data = solara.use_reactive(custom_data_initial)
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+ dark_effective = solara.lab.use_dark_effective()
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+
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+ def on_cif_file(file_info: FileInfo):
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+ custom_data.set({"data": file_info["data"], "format": "cif", "binary": False})
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+
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+ solara.Title("Alphafold3 result viewer")
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+ with solara.AppBar():
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+ solara.lab.ThemeToggle()
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+
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+ with solara.Sidebar():
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+ solara.FileDrop(label="Upload cif file", on_file=on_cif_file, lazy=False)
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+
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+ with solara.Card():
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+ theme = "dark" if dark_effective else "light"
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+ PDBeMolstar.element(
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+ molecule_id="" if not custom_data.value else "",
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+ custom_data=custom_data.value if custom_data.value else None,
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+ show_water=False,
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+ theme=theme,
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+ ).key(f"pdbemolstar-{dark_effective}")
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+
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+
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+ @solara.component
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+ def Layout(children):
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+ dark_effective = solara.lab.use_dark_effective()
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+ return solara.AppLayout(
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+ children=children, toolbar_dark=dark_effective, color=None
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+ ) # if dark_effective else "primary")
requirements.txt CHANGED
@@ -1 +1,2 @@
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- solara
 
 
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+ solara
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+ ipymolstar