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Commit History
Added CLI arg to disable GPU + bump v1.3.0
05cdb10
Fixed lungmasking [no ci]
e7921c2
Added feature to set batch-size through args [no ci]
df20506
Swapped 3D with 2D closing operation [no ci]
d949fe4
Support for setting closing smoothing radius [no ci]
7245c5a
Threshold default 0.5 + morphology post-processing smoothing step
9921695
Changed thresholding/resampling order step
fd5a329
Fixed dtype to threshold arg
82a4988
unverified
Support for setting threshold through argparse
9f284dc
unverified
Fixed typo in argparse method
eebfaf9
unverified
Fixed typo in lung-filter argparse
a0b45a1
unverified
Added lungmask filtering CI job
0b3c96a
unverified
Added support to state whether to filter lungs or not - default no
5c51ac6
unverified
Refactored confidence map thresholding code [no ci]
2a35518
unverified
Fixed postprocessing typo in lungmask usage
1ddaffd
unverified
refactored
549cc37
added lung mask postprocessing of tumor volume
ebb5411
cast output to uint8, removed redundancy in .gitignore, refactored CI
a01eb63
added more verbose and refactored
c59c074
added else statement
0afdf0e
typo
2386a26
enable dynamic selection of CUDA GPU only if available, else GPU inference
72623c0
Implement as command line tool
4719ce5
Vemund Fredriksen
commited on
Remove main method
0d8deb6
Vemund Fredriksen
commited on
Initial working pipeline
c35dad1
Vemund Fredriksen
commited on
Initial pre and post implementation
c7c329a
Vemund Fredriksen
commited on