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LungTumorMask

Commit History

numpy<=1.23.2 + Python 3.6-3.11
7cfe60d
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Deprecate Python 3.10
7ab87dc
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Support torch range to support Python 3.10
f8926b9
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Python 3.6-3.10 run CI
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Adding back Python 3.6 support
949adda
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monai<=0.8.1
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Removed Python 3.6 from CI
428925d
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torch==1.11 + deprecated Python 3.6 support
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torch==1.10
2d9bee3
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torch==1.11 + monai<=0.3.0
896d7e2
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Fixed typo in argparse method
eebfaf9
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Fixed typo in lung-filter argparse
a0b45a1
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Added lungmask filtering CI job
0b3c96a
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Added support to state whether to filter lungs or not - default no
5c51ac6
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Refactored confidence map thresholding code [no ci]
2a35518
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Bump v1.1.1
e6420ff
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Removed 3.9 support in setup.py
5b4dcad
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Removed dependency installation step as part of setup.py [no ci]
24b0e0a
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Removed python 3.9 for now
5cac4be
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Fixed postprocessing typo in lungmask usage
1ddaffd
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Updated install instructions [no ci]
43308ac
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Remove redundant __init__.py
e1f8c7f
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Reduce numpy version
dba99d8
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Acknowledgements improvement [no ci]
7435771
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Fixed typo in deps
d99ac7a
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Use older version of MONAI
14be879
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use lungmask fork [no ci]
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Run CI on Ubuntu 20.04
ff83c49
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added DOI shield
c76f70e
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bump version
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ignore .nii files
c1d6a45

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refactored
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added lung mask postprocessing of tumor volume
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set correct version
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cast output to uint8, removed redundancy in .gitignore, refactored CI
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published in PLOS ONE
651f412
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try recent release of gdown
4b282a9

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changed to pre-release of gdown and disabled cookies
53a9f17

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added more verbose and refactored
c59c074

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added else statement
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typo
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enable dynamic selection of CUDA GPU only if available, else GPU inference
72623c0

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added inference use case
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test single file only
422f868

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added download gdown test
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é
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added MIT license badge
938accb
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Merge branch 'main' of https://github.com/VemundFredriksen/LungTumorMask into main
7e951d1

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bumped version
40a9b1e

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Update README.md
8057d9c
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