initial revision

Dockerfile

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+FROM python:3.11
+
+WORKDIR /code
+
+COPY ./requirements.txt /code/requirements.txt
+
+RUN pip install --no-cache-dir --upgrade -r /code/requirements.txt
+
+# Download extinction risk predictions and prepare for use with datasette
+RUN mkdir /data
+ADD https://zenodo.org/records/10605228/files/Angiosperm_extinction_risk_predictions_v1.csv /data/Angiosperm_extinction_risk_predictions_v1.csv
+
+RUN csvs-to-sqlite /data/Angiosperm_extinction_risk_predictions_v1.csv /code/extinctionrisk.db
+RUN ls -l /code
+RUN sqlite-utils tables /code/extinctionrisk.db --counts
+RUN chmod 755 /code/extinctionrisk.db
+
+# Create datasette metadata file
+COPY ./metadata.json /code/metadata.json
+
+CMD ["datasette", "/code/extinctionrisk.db", "-m", "/code/metadata.json", "--host", "0.0.0.0", "--port", "7860", "--setting", "sql_time_limit_ms", "3500"]

README.md

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 ---
 title: Extinction Risk
 emoji: 🏢
-colorFrom: indigo
+colorFrom: red
 colorTo: blue
 sdk: docker
 pinned: false

metadata.json

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+{
+    "title": "Extinction risk predictions",
+    "description": "A datasette instance containing extinction risk predictions.",
+    "source": "https://spbachman.shinyapps.io/shiny_preds/",
+    "databases": {
+        "extinction-risk": {}
+    }
+}

requirements.txt

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+datasette
+sqlite-utils
+csvs-to-sqlite
+pandas==1.5.3