wenkai commited on
Commit
3660015
1 Parent(s): 0b7981d

Update app.py

Browse files
Files changed (1) hide show
  1. app.py +3 -1
app.py CHANGED
@@ -37,9 +37,11 @@ def generate_caption(protein, prompt):
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  repr_layers=[36]
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  truncation_seq_length=1024
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  toks_per_batch=4096
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-
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  dataset = FastaBatchedDataset([protein_name], [protein_seq])
 
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  batches = dataset.get_batch_indices(toks_per_batch, extra_toks_per_seq=1)
 
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  data_loader = torch.utils.data.DataLoader(
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  dataset, collate_fn=alphabet.get_batch_converter(truncation_seq_length), batch_sampler=batches
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  )
 
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  repr_layers=[36]
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  truncation_seq_length=1024
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  toks_per_batch=4096
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+ print("start")
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  dataset = FastaBatchedDataset([protein_name], [protein_seq])
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+ print("dataset prepared")
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  batches = dataset.get_batch_indices(toks_per_batch, extra_toks_per_seq=1)
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+ print("batches prepared")
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  data_loader = torch.utils.data.DataLoader(
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  dataset, collate_fn=alphabet.get_batch_converter(truncation_seq_length), batch_sampler=batches
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  )