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license: gpl-3.0

This repository contains the dataset used in our work.

  • masks: contains the 2D segmentation masks;

  • stl: contains the 3D masks obtained using PolNet;

  • Dataset 1:

Image Size (X×Y×Z) Train/Test
Split
PBS_new_ret1 5409×2979×31 Train
PBS_new_ret1b 3375×4599×56 Test
PBS_ret1-02 6237×3384×38 Test
PBS_ret4 5013×2979×43 Test
PBS_retina_5 4838×5561×39 Test
sFLT1_ret1 4617×5418×35 Train
sFLT1_ret4 4365×3978×64 Test
sFLT1_ret5 4365×3600×64 Test
VEGF_ret1 2979×4599×42 Train
VEGF_ret1b 5319×4878×61 Test
VEGF_ret3 5427×4194×46 Test
VEGF_ret7 5013×4194×38 Test
AngII_ret1 6273×3780×33 Train
AngII_ret2 4851×5571×42 Test
  • Datasets 2, 3 and 4:
Image Size (X×Y×Z)
Dataset 2 Captopril_new_Ret_1 4212×5427×35
Captopril_new_Ret_2 4194×5013×34
Captopril_new_Ret_3 4599×3789×36
Captopril_ret4 3206×3972×37
Captopril_ret5_2 3204×4365×54
Captopril_ret6 3600×4365×60
RGDS_2 3553×4000×64
RGDS_3 2258×3997×42
RGDS_4 3555×4428×48
Dataset 3 FLIJ7_TG_stiching_1 4590×2160×27
FLIJ7_TG_stiching_2ndExp_1 3384×5427×35
FLIJ8_WT_stiching_2ndExp_1 4617×5427×35
FLIJ9_TG_stiching_1 2709×5733×41
FLIJ9_TG_stiching_2ndExp_1 3402×5445×35
FLIO1a_TG_stiching_2ndExp_2 3388×2969×32
FLIO1b_TG_stiching_2ndExp_1 3783×3375×43
FLIO4_TG_stiching_2ndExp_1 3378×3787×28
FLIO5_TG_stiching_2ndExp_1 5004×3798×27
FLIO6_TG_stiching_1 4428×2700×40
FLIO6_TG_stiching_2 4203×4212×31
FLIO6_TG_stiching_3 4608×5022×44
FLIO8_TG_stiching_1 5004×3798×38
FLIP1_TG_stiching_1 4203×1764×23
FLIP1_TG_stiching_1Exp_1 1954×4094×41
FLIP1_TG_stiching_1Exp_2 3384×4815×34
FLIP1_TG_stiching_1Exp_3 4815×3033×30
FLIP1_TG_stiching_2 4608×5022×40
FLIP5_WT_stiching_2ndExp_1 2565×4608×30
Dataset 4 YES_retinas_h_KO4_C1 5632×6656×36
YES_retinas_b_WT2_C1 4608×4608×24
YES_retinas_a_WT1_C1 4608×5632×20
YES_retinas_f_KO2_C1 4608×5632×36
YES_retinas_c_WT3_C1 4608×5632×24
YES_retinas_g_KO3_C1 4608×4608×28
YES_retinas_e_KO1_C1 4608×4608×32