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--- |
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license: apache-2.0 |
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base_model: bert-base-cased |
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tags: |
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- generated_from_trainer |
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metrics: |
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- precision |
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- recall |
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- f1 |
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- accuracy |
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model-index: |
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- name: bert-finetuned-ner |
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results: [] |
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--- |
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<!-- This model card has been generated automatically according to the information the Trainer had access to. You |
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should probably proofread and complete it, then remove this comment. --> |
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# bert-finetuned-ner |
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This model is a fine-tuned version of [bert-base-cased](https://huggingface.co/bert-base-cased) on the None dataset. |
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It achieves the following results on the evaluation set: |
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- Loss: 0.2301 |
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- Precision: 0.5948 |
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- Recall: 0.6779 |
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- F1: 0.6336 |
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- Accuracy: 0.9265 |
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- Adr Precision: 0.5579 |
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- Adr Recall: 0.6812 |
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- Adr F1: 0.6134 |
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- Disease Precision: 0.2273 |
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- Disease Recall: 0.1562 |
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- Disease F1: 0.1852 |
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- Drug Precision: 0.8136 |
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- Drug Recall: 0.8775 |
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- Drug F1: 0.8443 |
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- Finding Precision: 0.2667 |
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- Finding Recall: 0.2759 |
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- Finding F1: 0.2712 |
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- Symptom Precision: 0.5 |
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- Symptom Recall: 0.0435 |
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- Symptom F1: 0.08 |
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- B-adr Precision: 0.7749 |
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- B-adr Recall: 0.8513 |
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- B-adr F1: 0.8113 |
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- B-disease Precision: 1.0 |
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- B-disease Recall: 0.1562 |
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- B-disease F1: 0.2703 |
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- B-drug Precision: 0.9327 |
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- B-drug Recall: 0.9557 |
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- B-drug F1: 0.9440 |
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- B-finding Precision: 0.5909 |
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- B-finding Recall: 0.4483 |
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- B-finding F1: 0.5098 |
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- B-symptom Precision: 0.5 |
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- B-symptom Recall: 0.0435 |
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- B-symptom F1: 0.08 |
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- I-adr Precision: 0.5725 |
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- I-adr Recall: 0.6782 |
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- I-adr F1: 0.6209 |
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- I-disease Precision: 0.4091 |
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- I-disease Recall: 0.3103 |
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- I-disease F1: 0.3529 |
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- I-drug Precision: 0.8458 |
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- I-drug Recall: 0.8873 |
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- I-drug F1: 0.8660 |
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- I-finding Precision: 0.3529 |
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- I-finding Recall: 0.2222 |
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- I-finding F1: 0.2727 |
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- I-symptom Precision: 0.0 |
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- I-symptom Recall: 0.0 |
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- I-symptom F1: 0.0 |
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- Macro Avg F1: 0.4728 |
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- Weighted Avg F1: 0.7278 |
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## Model description |
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More information needed |
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## Intended uses & limitations |
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More information needed |
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## Training and evaluation data |
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More information needed |
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## Training procedure |
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### Training hyperparameters |
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The following hyperparameters were used during training: |
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- learning_rate: 2e-05 |
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- train_batch_size: 8 |
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- eval_batch_size: 8 |
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- seed: 42 |
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- optimizer: Adam with betas=(0.9,0.999) and epsilon=1e-08 |
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- lr_scheduler_type: linear |
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- num_epochs: 3 |
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### Training results |
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| Training Loss | Epoch | Step | Validation Loss | Precision | Recall | F1 | Accuracy | Adr Precision | Adr Recall | Adr F1 | Disease Precision | Disease Recall | Disease F1 | Drug Precision | Drug Recall | Drug F1 | Finding Precision | Finding Recall | Finding F1 | Symptom Precision | Symptom Recall | Symptom F1 | B-adr Precision | B-adr Recall | B-adr F1 | B-disease Precision | B-disease Recall | B-disease F1 | B-drug Precision | B-drug Recall | B-drug F1 | B-finding Precision | B-finding Recall | B-finding F1 | B-symptom Precision | B-symptom Recall | B-symptom F1 | I-adr Precision | I-adr Recall | I-adr F1 | I-disease Precision | I-disease Recall | I-disease F1 | I-drug Precision | I-drug Recall | I-drug F1 | I-finding Precision | I-finding Recall | I-finding F1 | I-symptom Precision | I-symptom Recall | I-symptom F1 | Macro Avg F1 | Weighted Avg F1 | |
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|:-------------:|:-----:|:----:|:---------------:|:---------:|:------:|:------:|:--------:|:-------------:|:----------:|:------:|:-----------------:|:--------------:|:----------:|:--------------:|:-----------:|:-------:|:-----------------:|:--------------:|:----------:|:-----------------:|:--------------:|:----------:|:---------------:|:------------:|:--------:|:-------------------:|:----------------:|:------------:|:----------------:|:-------------:|:---------:|:-------------------:|:----------------:|:------------:|:-------------------:|:----------------:|:------------:|:---------------:|:------------:|:--------:|:-------------------:|:----------------:|:------------:|:----------------:|:-------------:|:---------:|:-------------------:|:----------------:|:------------:|:-------------------:|:----------------:|:------------:|:------------:|:---------------:| |
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| No log | 1.0 | 127 | 0.2653 | 0.5472 | 0.6201 | 0.5814 | 0.9128 | 0.4942 | 0.6376 | 0.5568 | 0.0 | 0.0 | 0.0 | 0.7952 | 0.8186 | 0.8068 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.7530 | 0.7731 | 0.7629 | 0.0 | 0.0 | 0.0 | 0.9179 | 0.8818 | 0.8995 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.4915 | 0.6325 | 0.5532 | 0.1429 | 0.0345 | 0.0556 | 0.855 | 0.8382 | 0.8465 | 0.3333 | 0.0370 | 0.0667 | 0.0 | 0.0 | 0.0 | 0.3184 | 0.6587 | |
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| No log | 2.0 | 254 | 0.2307 | 0.5896 | 0.6632 | 0.6242 | 0.9254 | 0.5546 | 0.6722 | 0.6077 | 0.2222 | 0.1875 | 0.2034 | 0.8093 | 0.8529 | 0.8305 | 0.2083 | 0.1724 | 0.1887 | 0.0 | 0.0 | 0.0 | 0.7663 | 0.8263 | 0.7952 | 1.0 | 0.1562 | 0.2703 | 0.9366 | 0.9458 | 0.9412 | 0.625 | 0.3448 | 0.4444 | 0.0 | 0.0 | 0.0 | 0.5649 | 0.6600 | 0.6088 | 0.2963 | 0.2759 | 0.2857 | 0.8495 | 0.8578 | 0.8537 | 0.3846 | 0.1852 | 0.25 | 0.0 | 0.0 | 0.0 | 0.4449 | 0.7127 | |
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| No log | 3.0 | 381 | 0.2301 | 0.5948 | 0.6779 | 0.6336 | 0.9265 | 0.5579 | 0.6812 | 0.6134 | 0.2273 | 0.1562 | 0.1852 | 0.8136 | 0.8775 | 0.8443 | 0.2667 | 0.2759 | 0.2712 | 0.5 | 0.0435 | 0.08 | 0.7749 | 0.8513 | 0.8113 | 1.0 | 0.1562 | 0.2703 | 0.9327 | 0.9557 | 0.9440 | 0.5909 | 0.4483 | 0.5098 | 0.5 | 0.0435 | 0.08 | 0.5725 | 0.6782 | 0.6209 | 0.4091 | 0.3103 | 0.3529 | 0.8458 | 0.8873 | 0.8660 | 0.3529 | 0.2222 | 0.2727 | 0.0 | 0.0 | 0.0 | 0.4728 | 0.7278 | |
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### Framework versions |
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- Transformers 4.35.2 |
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- Pytorch 2.1.0+cu118 |
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- Datasets 2.15.0 |
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- Tokenizers 0.15.0 |
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